Stem-loop stu-MIR8005a

Accession

MI0025804

Description

Solanum tuberosum stu-MIR8005a precursor miRNA

Gene family

MIPF0001677; MIR8005

Sequence

UUUAGAGUUUAAGGUUUAGAGUUUaagguuugggguuuaggguuuaggguuaagaguaucaugguuaggguuuaggguuuagggguuaggauauaggguuuaggauuuaggguuuagaguuuagggu
((((((.((((((.((((((.((((((.((((...(((((...(((((.((.(((.(...........).))).)).)))))...)))))...)))).)))))).)))))).)))))).))))))..

Structure

--      G      G      G      g    ggg     ggu     g  a   g auca 
  UUUAGA UUUAAG UUUAGA UUUaag uuug   uuuag   uuagg uu aga u    u
  |||||| |||||| |||||| |||||| ||||   |||||   ||||| || ||| |    g
  ggauuu agauuu ggauuu ggauuu ggau   ggauu   gauuu gg uuu g    g
ug      g      g      a      g    aua     ggg     g  a   g gauu 

Annotation confidence Not enough data

Genome context

JH137905.1: 1478170-1478296 [+]

Mature stu-miR8005a

• Accession: MIMAT0030895
• Description: Solanum tuberosum stu-miR8005a mature miRNA
• Sequence: 1 - UUUAGAGUUUAAGGUUUAGAGUUU - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233