Stem-loop stu-MIR8005b

Accession

MI0025805

Description

Solanum tuberosum stu-MIR8005b precursor miRNA

Gene family

MIPF0001677; MIR8005

Sequence

ACUCUAAAUUUUAAAUUCUAAAUCuaaaauaguaaaucauaaaucauaaauuuuaggauuuaaguuuuuaugauuuaaguuuuaugguuuaaggUUUAGAGUUUAAGGUUUAGAGUUU
(((((((((((((((((((((((((.((((.(((((.(.(((((((((((.((((.....))))..))))))))))).).))))).)))).)))))))))))))))))))))))))..

Structure

--                         a    a     u a           -u    g 
  ACUCUAAAUUUUAAAUUCUAAAUCu aaau guaaa c uaaaucauaaa  uuua g
  ||||||||||||||||||||||||| |||| ||||| | |||||||||||  |||| a
  UGAGAUUUGGAAUUUGAGAUUUgga uuug uauuu g auuuaguauuu  gaau u
UU                         a    g     u a           uu    u 

Annotation confidence Not enough data

Genome context

JH137959.1: 260188-260305 [-]

Mature stu-miR8005b-5p

• Accession: MIMAT0031191
• Description: Solanum tuberosum stu-miR8005b-5p mature miRNA
• Sequence: 1 - ACUCUAAAUUUUAAAUUCUAAAUC - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR8005b-3p

• Accession: MIMAT0030896
• Description: Solanum tuberosum stu-miR8005b-3p mature miRNA
• Sequence: 95 - UUUAGAGUUUAAGGUUUAGAGUUU - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233