miRBase entry: stu-MIR8012

Stem-loop stu-MIR8012


Accession
MI0025817
Description
Solanum tuberosum stu-MIR8012 precursor miRNA


Sequence

AUGACUUUAAGUCGCGUCUGGCCCgccacagcggcacccaguccacuacagcguccccgcuagagcgaccaaaaguuccgcuaaggcggguugcacgagacaaagaguuauuu
((((((((..(((.(((.(((((((((..(((((.((...(((..((..((((....))))..)).))).....)).)))))..))))))))).))).)))..))))))))..

Structure
--        AA   G   C         ac     c  --cca   ca  ac    u 
  AUGACUUU  GUC CGU UGGCCCgcc  agcgg ac     guc  cu  agcg c
  ||||||||  ||| ||| |||||||||  ||||| ||     |||  ||  ||||  
  uauugaga  cag gca guugggcgg  ucgcc ug     cag  ga  ucgc c
uu        aa   a   c         aa     u  aaaac   -c  ga    c 


Annotation confidence Not enough data
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Genome context
JH137959.1: 1216643-1216755 [+]

Database links

Mature stu-miR8012

Accession MIMAT0030908
Description Solanum tuberosum stu-miR8012 mature miRNA
Sequence 1 - AUGACUUUAAGUCGCGUCUGGCCC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233