Stem-loop stu-MIR8024a

Accession

MI0025832

Description

Solanum tuberosum stu-MIR8024a precursor miRNA

Gene family

MIPF0001789; MIR8024

Sequence

UUGAAGAAUUUAAAGACUUCAACUugcauacuuggaggauuugaagacgucaucuugcauacuuggaggauuugaagacuuaaacuugcauauUUGGAGGAUUUGAAGAUUUCAACU
((((((..((((((..((((((..((((......(((..((((((..(.(((...........))).)..))))))..))).....))))...))))))..))))))..))))))..

Structure

--      AA      GA      -CU    uacuug   ga      ga g   ucuu 
  UUGAAG  UUUAAA  CUUCAA   ugca      gag  uuugaa  c uca    g
  ||||||  ||||||  ||||||   ||||      |||  ||||||  | |||    c
  AACUUU  AAGUUU  GAGGUU   acgu      uuc  aaguuu  g ggu    a
UC      AG      AG      uau    -ucaaa   ag      ag a   ucau 

Annotation confidence Not enough data

Genome context

JH137805.1: 1984844-1984960 [-]

Mature stu-miR8024a-5p

• Accession: MIMAT0031201
• Description: Solanum tuberosum stu-miR8024a-5p mature miRNA
• Sequence: 1 - UUGAAGAAUUUAAAGACUUCAACU - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR8024a-3p

• Accession: MIMAT0030923
• Description: Solanum tuberosum stu-miR8024a-3p mature miRNA
• Sequence: 94 - UUGGAGGAUUUGAAGAUUUCAACU - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233