Stem-loop stu-MIR8033

Accession

MI0025852

Description

Solanum tuberosum stu-MIR8033 precursor miRNA

Literature search

1 open access papers mention stu-MIR8033
(3 sentences)

Sequence

UUCCAAAGCUGCAGAAAUGAGUuuuuuuuuaaacugaaaaaaaaaaacUCAAUUCUGCAGCUUUAGGAGU
((((((((((((((((.(((((((((((((........))))))))))))).)))))))))))).)))).

Structure

-    -            A             aaa 
 UUCC AAAGCUGCAGAA UGAGUuuuuuuuu   c
 |||| |||||||||||| |||||||||||||    
 GAGG UUUCGACGUCUU ACUcaaaaaaaaa   u
U    A            A             aag 

Annotation confidence Not enough data

Genome context

JH137849.1: 1423416-1423485 [+]

Mature stu-miR8033-5p

• Accession: MIMAT0030943
• Description: Solanum tuberosum stu-miR8033-5p mature miRNA
• Sequence: 1 - UUCCAAAGCUGCAGAAAUGAGU - 22
• Evidence: experimental ; Illumina [1]

Mature stu-miR8033-3p

• Accession: MIMAT0031214
• Description: Solanum tuberosum stu-miR8033-3p mature miRNA
• Sequence: 49 - UCAAUUCUGCAGCUUUAGGAGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233