miRBase entry: stu-MIR8039

Stem-loop stu-MIR8039


Accession
MI0025860
Description
Solanum tuberosum stu-MIR8039 precursor miRNA


Sequence

UUUCCUAUCUGAACUAUCACCaucuacuuaacuagauguguuuuaauacuuagaucgugauaguucauauaaaaaaaa
.....(((.(((((((((((.(((((......((((.....)))).....))))).))))))))))).))).......

Structure
--UUUCC   C           C     cuuaac    u 
       UAU UGAACUAUCAC aucua      uaga g
       ||| ||||||||||| |||||      |||| u
       aua acuugauagug uagau      auuu g
aaaaaaa   u           c     -ucaua    u 


Annotation confidence Not enough data
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Genome context
JH138751.1: 1849-1926 [-]

Database links

Mature stu-miR8039

Accession MIMAT0030951
Description Solanum tuberosum stu-miR8039 mature miRNA
Sequence 1 - UUUCCUAUCUGAACUAUCACC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233