miRBase entry: stu-MIR8041a

Stem-loop stu-MIR8041a


Accession
MI0025863
Description
Solanum tuberosum stu-MIR8041a precursor miRNA
Gene family
MIPF0001773; MIR8041


Sequence

GUGCUUUGCUAUUUUCAUUGacuucaaaauauugugauauugagaauucaAUGAUGUAUAGCAAAGAGCCU
((.(((((((((..(((((((.(((..(((((....)))))..))).)))))))...))))))))).))..

Structure
--  G         -UU       c   aa     u 
  GU CUUUGCUAU   UCAUUGa uuc  aauau g
  || |||||||||   ||||||| |||  |||||  
  CG GAAACGAUA   AGUAacu aag  uuaua u
UC  A         UGU       u   ag     g 


Annotation confidence Not enough data
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Genome context
JH137872.1: 167537-167607 [-]

Database links

Mature stu-miR8041a-5p

Accession MIMAT0031221
Description Solanum tuberosum stu-miR8041a-5p mature miRNA
Sequence 1 - GUGCUUUGCUAUUUUCAUUG - 20
Evidence experimental
Illumina [1]

Mature stu-miR8041a-3p

Accession MIMAT0030954
Description Solanum tuberosum stu-miR8041a-3p mature miRNA
Sequence 51 - AUGAUGUAUAGCAAAGAGCCU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233