Stem-loop stu-MIR156a

Accession

MI0025962

Description

Solanum tuberosum stu-MIR156a precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

9 open access papers mention stu-MIR156a
(23 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACagaugauaaagugcauggaaauugucugcaccuuacuccuuugugcucuuuauucuucugucauca
.(((((((((((((((((((((((.(((((.(((((.((......))))))).))).)).))))))))))))).))))))))))...

Structure

--U          -             u  -   a     u  aa 
   UGACAGAAGA UAGAGAGCACaga ga uaa gugca gg  a
   |||||||||| ||||||||||||| || ||| ||||| ||   
   acugucuucu auuucucguguuu cu auu cacgu cu  u
acu          u             c  c   c     -  gu 

Annotation confidence Not enough data

Genome context

JH137878.1: 427242-427328 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from stu-MIR156a

Mature stu-miR156a

• Accession: MIMAT0031296
• Description: Solanum tuberosum stu-miR156a mature miRNA
• Sequence: 1 - UUGACAGAAGAUAGAGAGCAC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233