miRBase entry: stu-MIR167d

Stem-loop stu-MIR167d


Accession
MI0025970
Description
Solanum tuberosum stu-MIR167d precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
4 open access papers mention stu-MIR167d
(9 sentences)

Sequence

UGAAGCUGCCAGCAUGAUCUAaacuuaccuacaaauuuauauugaggcaagaucaGAUCAUGUGGUUGCUUCACC
((((((.((((.((((((((...(((.(((.(((.......)))))).)))...)))))))))))).))))))..

Structure
--      U    G        Aaa   a   a   au 
  UGAAGC GCCA CAUGAUCU   cuu ccu caa  u
  |||||| |||| ||||||||   ||| ||| |||  u
  ACUUCG UGGU GUACUAGa   gaa gga guu  a
CC      U    -        cua   c   -   au 


Annotation confidence Not enough data
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Genome context
JH138225.1: 216951-217025 [-]

Database links

Mature stu-miR167d-5p

Accession MIMAT0031309
Description Solanum tuberosum stu-miR167d-5p mature miRNA
Sequence 1 - UGAAGCUGCCAGCAUGAUCUA - 21
Evidence experimental
Illumina [1]

Mature stu-miR167d-3p

Accession MIMAT0031310
Description Solanum tuberosum stu-miR167d-3p mature miRNA
Sequence 56 - GAUCAUGUGGUUGCUUCACC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233