Stem-loop sequence ppe-MIR160b

Accession

MI0026067 (change log)

Description

Prunus persica miR160b stem-loop

Gene family

MIPF0000032; MIR160

Literature search

9 open access papers mention ppe-MIR160b
(23 sentences)

Stem-loop

   u   c          -au     aaguaua       c       cu          ug a   uc   c  a 
5'  gaa auacgcauag   auaca       uaugugc uggcucc  guaugccauu  c gag  cca cg a
    ||| ||||||||||   |||||       ||||||| |||||||  ||||||||||  | |||  ||| || c
3'  cuu uguguguguc   ugugu       auauacg accgagg  uaugcgguag  g cuc  ggu gc a
   a   -          cuu     -acccaa       u       ag          gu c   -c   a  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG2: 24579519-24579663 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026067

Mature sequence ppe-miR160b

• Accession: MIMAT0031439
• Sequence: 34 - ugccuggcucccuguaugcca - 54
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).