Stem-loop sequence ppe-MIR169a

Accession

MI0026083 (change log)

Description

Prunus persica miR169a stem-loop

Gene family

MIPF0000037; MIR169_2

Literature search

7 open access papers mention ppe-MIR169a
(20 sentences)

Stem-loop

             u   u      agcac      u gg u  c         ug           uuu  agua   --    u 
5' agucucagag guu acauga     aagaga u  a ug agccaagga  acuugccggca   ac    cuc  uugc u
   |||||||||| ||| ||||||     |||||| |  | || |||||||||  |||||||||||   ||    |||  |||| u
3' ucagagucuc cga uguacu     uucucu g  u ac ucgguuucu  ugaacggccgu   ug    gag  gacg a
             -   c      -cuuc      c uu u  a         gu           --u  ----   uu    u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG1: 5674587-5674743 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026083

Mature sequence ppe-miR169a

• Accession: MIMAT0031455
• Sequence: 41 - cagccaaggaugacuugccgg - 61
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).