Stem-loop sequence ppe-MIR169b

AccessionMI0026084 (change log)
DescriptionPrunus persica miR169b stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

7 open access papers mention ppe-MIR169b
(20 sentences)

Stem-loop 
             u   u      agcacu     u gg u  c         ug           -uuua    acucu   u 
5' agucucagag guu acauga      agaga u  a ug agccaagga  acuugccggca     cagu     ugc u
   |||||||||| ||| ||||||      ||||| |  | || |||||||||  |||||||||||     ||||     ||| u
3' ucagagucuc cga uguacu      ucucu g  u ac ucgguuucu  ugaacggccgu     gucg     acg a
             -   c      -cuucu     c uu u  a         gu           uugga    -----   u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG1: 5647462-5647618 [+]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR169b
ppe-MIR169lchrG1: 5641715-5641875 [-]
ppe-MIR169echrG1: 5644236-5644371 [+]
ppe-MIR169bchrG1: 5647462-5647618 [+]
Database links

Mature sequence ppe-miR169b

Accession MIMAT0031456
Sequence

41 -  

cagccaaggaugacuugccgg

 - 61

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).