Stem-loop sequence ppe-MIR169l

AccessionMI0026093 (change log)
DescriptionPrunus persica miR169l stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

7 open access papers mention ppe-MIR169l
(20 sentences)

Stem-loop 
         uaaa             aa   u          ug         ug         -  u  u    --uac  cuc 
5' uuuuuc    gcauugcauggaa  gaa agagucuaac  agccaagga  aauugccgg ca cg auau     gc   a
   ||||||    |||||||||||||  ||| ||||||||||  |||||||||  ||||||||| || || ||||     ||    
3' agaaag    cguaacguaccuu  cuu ucucggguug  ucgguucuu  uuaacggcc gu gu uaua     cg   a
         -uac             -g   c          ua         gu         a  u  u    ucuaa  uaa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG1: 5641715-5641875 [-]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR169l
ppe-MIR169bchrG1: 5647462-5647618 [+]
ppe-MIR169echrG1: 5644236-5644371 [+]
ppe-MIR169lchrG1: 5641715-5641875 [-]
Database links

Mature sequence ppe-miR169l

Accession MIMAT0031465
Sequence

41 -  

gagccaaggaugaauugccgg

 - 61

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).