Stem-loop sequence ppe-MIR172b

Accession

MI0026096 (change log)

Description

Prunus persica miR172b stem-loop

Gene family

MIPF0000035; MIR172

Literature search

9 open access papers mention ppe-MIR172b
(35 sentences)

Stem-loop

       a  gu    g            c        a   -  gaucaa       gugaca        uua 
5' aguc uu  uugc ggugcagcauca caagauuc caa cu      gggcaca      ucaugaug   u
   |||| ||  |||| |||||||||||| |||||||| ||| ||      |||||||      ||||||||   g
3' ucag ag  aacg cuacgucguagu guucuaag guu ga      ucugugu      aguauuau   a
       c  au    a            a        a   u  --aucc       ---auc        uuu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG2: 24261182-24261322 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026096

Mature sequence ppe-miR172b

• Accession: MIMAT0031470
• Sequence: 106 - agaaucuugaugaugcugcau - 126
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).