Stem-loop ppe-MIR393a

Accession

MI0026100

Description

Prunus persica ppe-MIR393a precursor miRNA

Literature search

8 open access papers mention ppe-MIR393a
(23 sentences)

Sequence

uagaggaagCAUCCAAAGGGAUCGCAUUGAucccaacuagcuaucucuuccaugguuuaauuuggaucaugcuaucccuuuggauaucuccuuug
(((((((...((((((((((((.((((.(((((.....((((((.......))))))......))))))))).))))))))))))...)))))))

Structure

       agC            C    U     -caacu      cu 
uagagga   AUCCAAAGGGAU GCAU GAucc      agcuau  c
|||||||   |||||||||||| |||| |||||      ||||||  u
guuuccu   uagguuucccua cgua cuagg      uuggua  u
       cua            u    -     uuuaau      cc 

Annotation confidence Low

Genome context

chrG2: 26224921-26225015 [+]

Mature ppe-miR393a

• Accession: MIMAT0031474
• Description: Prunus persica ppe-miR393a mature miRNA
• Sequence: 10 - CAUCCAAAGGGAUCGCAUUGA - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149