Stem-loop sequence ppe-MIR395f

AccessionMI0026108 (change log)
DescriptionPrunus persica miR395f stem-loop
Gene family MIPF0000016; MIR395
Literature search

3 open access papers mention ppe-MIR395f
(13 sentences)

Stem-loop 
            u c  ua                    u   -   -----  c    ---             
5' caucaggug c cc  gaguuuccucgaacacuuca uag gau     gu uaac   ucucuuaauuaa 
   ||||||||| | ||  |||||||||||||||||||| ||| |||     || ||||   ||||||||||| a
3' guaguuuac g gg  cucaaggggguuugugaagu auc cug     ca auug   agggaauuaauc 
            u u  gc                    c   u   acauu  u    aau
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG1: 27781156-27781289 [+]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR395f
ppe-MIR395bchrG1: 27773971-27774095 [+]
ppe-MIR395kchrG1: 27779990-27780084 [-]
ppe-MIR395fchrG1: 27781156-27781289 [+]
Database links

Mature sequence ppe-miR395f

Accession MIMAT0031484
Sequence

98 -  

cugaaguguuugggggaacuc

 - 118

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).