Stem-loop sequence ppe-MIR396b

Accession

MI0026119 (change log)

Description

Prunus persica miR396b stem-loop

Gene family

MIPF0000047; MIR396

Literature search

6 open access papers mention ppe-MIR396b
(16 sentences)

Stem-loop

         c                   a    a  ucuu    gucua    u   gcu 
5' gucaug uuuuccacagcuuucuuga cuuc au    ugcu     agcu auc   u
   |||||| ||||||||||||||||||| |||| ||    ||||     |||| |||    
3' cgguac agagggugucgaaagaacu gaag ua    gcga     ucga uag   u
         a                   c    c  --cc    -----    u   aac 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG7: 21072692-21072802 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026119

Mature sequence ppe-miR396b

• Accession: MIMAT0031495
• Sequence: 10 - uuccacagcuuucuugaacuu - 30
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).