Stem-loop sequence ppe-MIR399b

AccessionMI0026122 (change log)
DescriptionPrunus persica miR399b stem-loop
Gene family MIPF0000015; MIR399
Literature search

5 open access papers mention ppe-MIR399b
(7 sentences)

Stem-loop 
   u    aa                         uaauuauaua          auu    cuca 
5'  gaau  cagggcaauuuuccuuuggcagaaa          uauuuggugc   uacu    a
    ||||  |||||||||||||||||||||||||          ||||||||||   ||||     
3'  cuua  gucccguuaagaggaaaccgucuuu          guaagccacg   auga    u
   a    cc                         ---------c          gcc    acuc
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG4: 3186487-3186605 [+]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR399b
ppe-MIR399bchrG4: 3186487-3186605 [+]
ppe-MIR399mchrG4: 3193035-3193156 [-]
Database links

Mature sequence ppe-miR399b

Accession MIMAT0031498
Sequence

90 -  

ucugccaaaggagaauugccc

 - 110

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).