Stem-loop sequence ppe-MIR399e

Accession

MI0026125 (change log)

Description

Prunus persica miR399e stem-loop

Gene family

MIPF0000015; MIR399

Literature search

4 open access papers mention ppe-MIR399e
(5 sentences)

Stem-loop

        -         a      uc     uc        -  ---cu     c  a    gcu 
5' uaagc aaagcaguc uagggc  cucuu  uuggcagg ca     gguga ug ugca   a
   ||||| ||||||||| ||||||  |||||  |||||||| ||     ||||| || ||||    
3' auucg uuucguuag aucccg  gagaa  aaccgucc gu     ucacu ac augu   c
        g         c      uu     ga        a  uacuu     a  -    aaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG2: 28345788-28345909 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026125

Mature sequence ppe-miR399e

• Accession: MIMAT0031501
• Sequence: 86 - ugccaaagaagaguugcccua - 106
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).