Stem-loop sequence ppe-MIR399j

AccessionMI0026130 (change log)
DescriptionPrunus persica miR399j stem-loop
Gene family MIPF0000015; MIR399
Literature search

4 open access papers mention ppe-MIR399j
(5 sentences)

Stem-loop 
   ucaaa     -         a      uc     uc        -  ---cu     c  a    gcu 
5'      uaagc aaagcaguc uagggc  cucuu  uuggcagg ca     gguga ug ugca   a
        ||||| ||||||||| ||||||  |||||  |||||||| ||     ||||| || ||||    
3'      auucg uuucguuag aucccg  gagaa  aaccgucc gu     ucacu ac acgu   c
   -agua     g         c      uu     ga        a  uacuu     a  -    aaa
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG3: 1558106-1558236 [-]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR399j
ppe-MIR399lchrG3: 1562772-1562902 [-]
ppe-MIR399jchrG3: 1558106-1558236 [-]
Database links

Mature sequence ppe-miR399j

Accession MIMAT0031506
Sequence

91 -  

ugccaaagaagaguugcccua

 - 111

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).