Stem-loop sequence ppe-MIR399m

AccessionMI0026133 (change log)
DescriptionPrunus persica miR399m stem-loop
Gene family MIPF0000015; MIR399
Literature search

4 open access papers mention ppe-MIR399m
(5 sentences)

Stem-loop 
   ca       g      c       u   -    u    uu    a   uuc   c ga  - u 
5'   gggcaaa ucuccu uggcaug ggc cacu auaa  auaa ugc   ggg u  gc c c
     ||||||| |||||| ||||||| ||| |||| ||||  |||| |||   ||| |  || | a
3'   cucguuu agagga accguau ucg guga uguu  uauu acg   ccc a  cg g g
   gg       -      a       u   u    -    cu    -   -uu   - aa  a u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG4: 3193035-3193156 [-]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR399m
ppe-MIR399mchrG4: 3193035-3193156 [-]
ppe-MIR399bchrG4: 3186487-3186605 [+]
Database links

Mature sequence ppe-miR399m

Accession MIMAT0031509
Sequence

102 -  

ugccaaaggagauuugcucgg

 - 122

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).