Stem-loop sequence ppe-MIR8122

Accession

MI0026146 (change log)

Description

Prunus persica miR8122 stem-loop

Stem-loop

   -c u     u  u                          c                     g            -  uc     g 
5'   g agucg cu cguugaagucuuuccacagaucuuuc ucauuuugacaauuccgguga ggcagauugaag ca  uguuu u
     | ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||  ||||| u
3'   c ucagu ga gcaacuucagaaagguguuuagaagg aguaaaacuguuaaggccacu ccgucuaacuuc gu  acgaa c
   gu -     -  -                          a                     g            c  cu     g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG7: 18519873-18520040 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026146

Mature sequence ppe-miR8122-5p

• Accession: MIMAT0031523
• Sequence: 24 - uuccacagaucuuuccucauu - 44
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR8122-3p

• Accession: MIMAT0031524
• Sequence: 129 - ugaaggaagauuuguggaaag - 149
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).