Stem-loop sequence ppe-MIR8126

Accession

MI0026154 (change log)

Description

Prunus persica miR8126 stem-loop

Stem-loop

        -      ---uu     uu    g      uu  auc       ac   a             u         u  aaac    --    ----u g 
5' cuacu uuacuc     gugcu  agga guuuuu  ua   uucccgu  cac uuucugagucaga uacugaaua ca    accu  uuca     c g
   ||||| ||||||     |||||  |||| ||||||  ||   |||||||  ||| ||||||||||||| ||||||||| ||    ||||  ||||     |  
3' gauga agugag     uaugg  uuuu uaaagg  au   aagggug  gug aaagacucaguuu augacuuau gu    ugga  aagu     g a
        c      ucuuu     --    g      cu  ---       cu   g             u         c  ----    ua    ucugu a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG6: 8374973-8375159 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026154

Mature sequence ppe-miR8126-5p

• Accession: MIMAT0031538
• Sequence: 54 - ucugagucagauuacugaaua - 74
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR8126-3p

• Accession: MIMAT0031539
• Sequence: 117 - uucaguauuuugacucagaa - 136
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).