Stem-loop ppe-MIR477

Accession

MI0026155

Description

Prunus persica ppe-MIR477 precursor miRNA

Gene family

MIPF0000216; MIR477

Sequence

aaggcauuuuuguugcucACUCUCCCUCAAAGGCUUCUAGcaaugucagaaauggcgagcuCGAAGCCUUUGGGGAGAGUAAacaaaaaaugucuu
((((((((((((((....((((((((.((((((((((.(((..(((((....))))).))).)))))))))))))))))).))).)))))))))))

Structure

           -   gcuc        U          U   aa     g 
aaggcauuuuu guu    ACUCUCCC CAAAGGCUUC AGc  uguca a
||||||||||| |||    |||||||| |||||||||| |||  |||||  
uucuguaaaaa caA    UGAGAGGG GUUUCCGAAG ucg  gcggu a
           a   ---A        -          C   -a     a 

Annotation confidence Not enough data

Genome context

chrG5: 11887689-11887784 [+]

Mature ppe-miR477-5p

• Accession: MIMAT0031540
• Description: Prunus persica ppe-miR477-5p mature miRNA
• Sequence: 19 - ACUCUCCCUCAAAGGCUUCUAG - 40
• Evidence: experimental ; Illumina [1]

Mature ppe-miR477-3p

• Accession: MIMAT0031541
• Description: Prunus persica ppe-miR477-3p mature miRNA
• Sequence: 62 - CGAAGCCUUUGGGGAGAGUAA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149