Stem-loop sequence ppe-MIR8127

Accession

MI0026158 (change log)

Description

Prunus persica miR8127 stem-loop

Stem-loop

                  g      c      g       c       gc               ca                ggacauauagucuccaacccauuuccugcu 
5' uccaucccauuuccu cuuugg uucugg uucuugc agaaggu  ugaggcaacugugga  uacccuuugaaaaaau                              u
   ||||||||||||||| |||||| |||||| ||||||| |||||||  |||||||||||||||  ||||||||||||||||                               
3' agguaggguaaagga ggaacc gggacc aagaacg ucuucca  guuccguugacaccu  augggaaacuuuuuua                              u
                  g      u      g       a       aa               ac                acuguugaacuuccgacguacacuaaacga 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG2: 22081974-22082195 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026158

Mature sequence ppe-miR8127-5p

• Accession: MIMAT0031546
• Sequence: 53 - caacuguggacauacccuuug - 73
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR8127-3p

• Accession: MIMAT0031547
• Sequence: 148 - uucaaaggguacauccacagu - 168
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).