Stem-loop sequence ppe-MIR5225

AccessionMI0026159 (change log)
DescriptionPrunus persica miR5225 stem-loop
Gene family MIPF0001388; MIR5225
Stem-loop 
         uuc  -         u    u           c   aaa   aau  u           ac     au 
5' aucaaa   gu aggggcuuc gucg aggagagaugg gcc   ugc   ca auugguuuggu  uaauu  g
   ||||||   || ||||||||| |||| ||||||||||| |||   |||   || |||||||||||  |||||  g
3' uaguuu   ca uccccgaag cagc uccucucuacu ugg   acg   gu uaaccgaaucg  auuaa  u
         ---  c         u    -           u   gcc   --g  u           aa     ga
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2) Overlapping transcripts
chrG3: 25326751-25326894 [-]
intergenic
Clustered miRNAs
< 10kb from ppe-MIR5225
ppe-MIR3627chrG3: 25329223-25329326 [-]
ppe-MIR5225chrG3: 25326751-25326894 [-]
Database links

Mature sequence ppe-miR5225-5p

Accession MIMAT0031548
Sequence

19 -  

ucugucguaggagagauggcgc

 - 40

Get sequence
Evidence experimental; Illumina [1]

Mature sequence ppe-miR5225-3p

Accession MIMAT0031549
Sequence

111 -  

ucaucucuccucgacugaa

 - 129

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).