Stem-loop sequence ppe-MIR8128

Accession

MI0026160 (change log)

Description

Prunus persica miR8128 stem-loop

Stem-loop

           g c     aauug          -  ucuu g     g       cag       c       g      ccuauc   g 
5' aaaccucu c gacga     cgucggcaca gu    u ccggc aaauuug   gauuaga cucuccc acgaaa      ucu c
   |||||||| | |||||     |||||||||| ||    | ||||| |||||||   ||||||| ||||||| ||||||      ||| c
3' uuuggaga g cugcu     gcagucgugu ca    a ggccg uuuaaac   cuaaucu gagaggg ugcuuu      aga g
           g a     gauaa          u  -uau g     g       aag       a       g      ----ca   a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG7: 17931443-17931615 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026160

Mature sequence ppe-miR8128-5p

• Accession: MIMAT0031550
• Sequence: 57 - auuagaccucucccgacgaaa - 77
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR8128-3p

• Accession: MIMAT0031551
• Sequence: 99 - ucguggggagagaucuaaucg - 119
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).