Stem-loop sequence ppe-MIR8129

Accession

MI0026162 (change log)

Description

Prunus persica miR8129 stem-loop

Stem-loop

          -au   uu      u   ccg        c                        u   -aacag  aggaaaau 
5' uauauau   cag  auucuc uau   gauauccg acauuauuauuguguggaugcuau gua      gc        a
   |||||||   |||  |||||| |||   |||||||| |||||||||||||||||||||||| |||      ||        g
3' auauaua   guc  uaagag aug   cuguaggc uguaauaauagcacgccugcggua cau      ug        g
          cau   uu      u   caa        c                        -   aaaaca  auggggag 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG6: 21765562-21765723 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026162

Mature sequence ppe-miR8129-5p

• Accession: MIMAT0031554
• Sequence: 28 - gauauccgcacauuauuauug - 48
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR8129-3p

• Accession: MIMAT0031555
• Sequence: 116 - auaauaauguccggaugucaa - 136
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).