Stem-loop sequence ppe-MIR8133

Accession

MI0026167 (change log)

Description

Prunus persica miR8133 stem-loop

Literature search

1 open access papers mention ppe-MIR8133
(3 sentences)

Stem-loop

            a   aua            a    c a              a g  c     -   uuuucuaccacuccuc 
5' uauauauau cag   uucuccugugcg acgu c gaaguuauuacugu c ga gccau gua                c
   ||||||||| |||   |||||||||||| |||| | |||||||||||||| | || ||||| |||                 
3' guauauaug guc   aaggggauacgc ugca g cuucaauaauggua g cu cggua cau                c
            -   aag            c    a c              c g  a     a   uugucccuccuuuacu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG1: 498109-498270 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026167

Mature sequence ppe-miR8133-5p

• Accession: MIMAT0031563
• Sequence: 20 - uccugugcgaacguccagaag - 40
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR8133-3p

• Accession: MIMAT0031564
• Sequence: 121 - uaacuuccgaacguccgcaua - 141
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).