miRBase entry: ppe-MIR8133

Stem-loop ppe-MIR8133


Accession
MI0026167
Description
Prunus persica ppe-MIR8133 precursor miRNA

Literature search
1 open access papers mention ppe-MIR8133
(3 sentences)

Sequence

uauauauauacagauauucUCCUGUGCGAACGUCCAGAAGuuauuacuguacggacgccauguauuuucuaccacuccucccucauuuccucccuguuuacaauggcaucggcaugguaaUAACUUCCGAACGUCCGCAUAggggaagaacugguauauaug
(((((((((.(((...((((((((((((.((((.(.((((((((((((((.(.((.((((((((..................................))).))))).)).).)))))))))))))).).)))).))))))))))))...))))))))))))

Structure
         a   aua            A    C A              a g  c     -   uuuucuaccacuccuc 
uauauauau cag   uucUCCUGUGCG ACGU C GAAGuuauuacugu c ga gccau gua                c
||||||||| |||   |||||||||||| |||| | |||||||||||||| | || ||||| |||                 
guauauaug guc   aaggggAUACGC UGCA G CUUCAAUaauggua g cu cggua cau                c
         -   aag            C    A C              c g  a     a   uugucccuccuuuacu 


Annotation confidence Not enough data
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Genome context
chrG1: 498109-498270 [+]

Database links

Mature ppe-miR8133-5p

Accession MIMAT0031563
Description Prunus persica ppe-miR8133-5p mature miRNA
Sequence 20 - UCCUGUGCGAACGUCCAGAAG - 40
Evidence experimental
Illumina [1]

Mature ppe-miR8133-3p

Accession MIMAT0031564
Description Prunus persica ppe-miR8133-3p mature miRNA
Sequence 121 - UAACUUCCGAACGUCCGCAUA - 141
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149