Stem-loop sequence ppe-MIR6288c

Accession

MI0026168 (change log)

Description

Prunus persica miR6288c stem-loop

Gene family

MIPF0001696; MIR6288

Stem-loop

                                a       --u  gu 
5' aaaacuagccacuuguuauuuuuuaauug uucuuau   gu  u
   ||||||||||||||||||||||||||||| |||||||   ||   
3' uuuugaucggugaacaauaaaagauuaac aagaaua   ua  a
                                c       uuu  aa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Prunus_persica_NCBIv2; GCA_000346465.2): chrG6: 9984634-9984721 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0026168

Mature sequence ppe-miR6288c-5p

• Accession: MIMAT0031565
• Sequence: 12 - cuuguuauuuuuuaauugauu - 32
• Evidence: experimental; Illumina [1]

Mature sequence ppe-miR6288c-3p

• Accession: MIMAT0031566
• Sequence: 57 - aaccaauuagaaaauaacaagugg - 80
• Evidence: experimental; Illumina [1]

References

1. PMID:22909020 "Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs" Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z BMC Plant Biol. 12:149(2012).