Stem-loop bbe-let-7a-2

Accession

MI0026171

Description

Branchiostoma belcheri bbe-let-7a-2 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

1 open access papers mention bbe-let-7a-2
(3 sentences)

Sequence

agacaagggugcgccugaggUGAGGUAGUAGGUUGUAUAGUUgagaaguacaucauuggagauaaCUGUGCAACCUGCUAGCUCUCCuuggggcaugcc
......(.((((.(((((((.(((.((((((((((((((((((.......((....))....)))))))))))))))))).))).))))))))))).).

Structure

agacaa g    g       U   G                  agaagua  u 
      g gugc ccugagg GAG UAGUAGGUUGUAUAGUUg       ca c
      | |||| ||||||| ||| ||||||||||||||||||       ||  
      c uacg ggguuCC CUC AUCGUCCAACGUGUCaau       gu a
-----c g    -       U   G                  ---agag  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-let-7a-5p

• Accession: MIMAT0031568
• Description: Branchiostoma belcheri bbe-let-7a-5p mature miRNA
• Sequence: 21 - UGAGGUAGUAGGUUGUAUAGUU - 42
• Evidence: not_experimental

Mature bbe-let-7a-2-3p

• Accession: MIMAT0031862
• Description: Branchiostoma belcheri bbe-let-7a-2-3p mature miRNA
• Sequence: 66 - CUGUGCAACCUGCUAGCUCUCC - 87
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500