Stem-loop bbe-mir-10b

Accession

MI0026174

Description

Branchiostoma belcheri bbe-mir-10b precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

1 open access papers mention bbe-mir-10b
(1 sentences)

Sequence

acguuuuaguggucuauauaAACCCUGUGGAUCCGAUCUUGUGUcgcuauaaaaaccgCAAGGUGGGAUUGACAGGUUCAuauagaacacgauaagcaucc
..((((..(((.(((((((.((((.(((.(((((.((((((((.............)))))))).))))).))))))).))))))).)))...))))....

Structure

--ac    -ua   g       a    C   G     G        Ucgcu 
    guuu   gug ucuauau AACC UGU GAUCC AUCUUGUG     a
    ||||   ||| ||||||| |||| ||| ||||| ||||||||     u
    cgaa   cac agauauA UUGG ACA UUAGG UGGAACgc     a
ccua    uag   a       C    -   G     G        caaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-10b-5p

• Accession: MIMAT0031574
• Description: Branchiostoma belcheri bbe-miR-10b-5p mature miRNA
• Sequence: 21 - AACCCUGUGGAUCCGAUCUUGUGU - 44
• Evidence: not_experimental

Mature bbe-miR-10b-3p

• Accession: MIMAT0031575
• Description: Branchiostoma belcheri bbe-miR-10b-3p mature miRNA
• Sequence: 59 - CAAGGUGGGAUUGACAGGUUCA - 80
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500