Stem-loop bbe-mir-182a

Accession

MI0026187

Description

Branchiostoma belcheri bbe-mir-182a precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

gaucuuucggguucaauuugCUUGGCACUAGUGGAAUUCUUUGuuuaggaaccagugcauagaugucauugagucaAAGAAUUCCCCAGUACCAAGCAaauu
..............(((((((((((.(((.(.(((((((((((.......(((((((((....)).))))).)))))))))))))).))).)))))))))))

Structure

gaucuuucggguuc           C   A U           uuuagga  -     -  u 
              aauuugCUUGG ACU G GGAAUUCUUUG       ac cagug ca a
              ||||||||||| ||| | |||||||||||       || ||||| ||  
              uuaaACGAACC UGA C CCUUAAGAAac       ug guuac gu g
--------------           A   C -           -------  a     u  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-182a-5p

• Accession: MIMAT0031594
• Description: Branchiostoma belcheri bbe-miR-182a-5p mature miRNA
• Sequence: 21 - CUUGGCACUAGUGGAAUUCUUUG - 43
• Evidence: not_experimental

Mature bbe-miR-182a-3p

• Accession: MIMAT0031595
• Description: Branchiostoma belcheri bbe-miR-182a-3p mature miRNA
• Sequence: 77 - AAGAAUUCCCCAGUACCAAGCA - 98
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500