miRBase entry: bbe-mir-182c

Stem-loop bbe-mir-182c


Accession
MI0026189
Description
Branchiostoma belcheri bbe-mir-182c precursor miRNA
Gene family
MIPF0000116; mir-182


Sequence

accucugggucagcuuaCUUGGCACUUGUGGAAUUUUUUGcucagcaagacuuugugucaaagaauuccccaguacuaaguaugcuggcuugggaug
...(((((((((((.(((((((.(((.(.(((((((((((....((((....))))..)))))))))))).))).))))))).)))))))))))...

Structure
acc           u       C   U U           cuca    g 
   ucugggucagc uaCUUGG ACU G GGAAUUUUUUG    gcaa a
   ||||||||||| ||||||| ||| | |||||||||||    ||||  
   ggguucggucg augaauc uga c ccuuaagaaac    uguu c
gua           u       a   c -           --ug    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-182c-5p

Accession MIMAT0031598
Description Branchiostoma belcheri bbe-miR-182c-5p mature miRNA
Sequence 18 - CUUGGCACUUGUGGAAUUUUUUG - 40
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500