miRBase entry: bbe-mir-183

Stem-loop bbe-mir-183


Accession
MI0026191
Description
Branchiostoma belcheri bbe-mir-183 precursor miRNA
Gene family
MIPF0000066; mir-183

Literature search
1 open access papers mention bbe-mir-183
(3 sentences)

Sequence

acacgugcccguucacggucUAUGGCACUGGUAGAAUUCACUGAucguagacaccagugauucuucagucagccauaaacuguggcgggaacugaucauc
.((.((.(((((.((((((.(((((((((((.(((((.(((((...........)))))))))))))))..)))))).))))))))))).))))......

Structure
-----a  c  g     u      c      --     U     U     Aucg 
      ca gu cccgu cacggu UAUGGC  ACUGG AGAAU CACUG    u
      || || ||||| |||||| ||||||  ||||| ||||| |||||    a
      gu ca gggcg guguca auaccg  ugacu ucuua gugac    g
cuacua  -  a     -      a      ac     -     -     caca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-183-5p

Accession MIMAT0031600
Description Branchiostoma belcheri bbe-miR-183-5p mature miRNA
Sequence 21 - UAUGGCACUGGUAGAAUUCACUGA - 44
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500