miRBase entry: bbe-mir-219-1

Stem-loop bbe-mir-219-1


Accession
MI0026223
Description
Branchiostoma belcheri bbe-mir-219-1 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

ccagugcUGAUUGUCCAAACGCAAUUCUuguuugaccuuugaaccAAGAACUGCGCUGGACAUCAGCaauugacgcugccuac
.((((((((((.(((((..((((.(((((((((((...))))).)))))).)))).))))))))))).))))...........

Structure
----------c    -      U     AA    A      -     c 
           cagu gcUGAU GUCCA  CGCA UUCUug uuuga  
           |||| |||||| |||||  |||| |||||| ||||| c
           guua CGACUA CAGGU  GCGU AAGAAc aaguu  
cauccgucgca    a      -     -C    C      c     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-219-5p

Accession MIMAT0031650
Description Branchiostoma belcheri bbe-miR-219-5p mature miRNA
Sequence 8 - UGAUUGUCCAAACGCAAUUCU - 28
Evidence not_experimental

Mature bbe-miR-219-3p

Accession MIMAT0031651
Description Branchiostoma belcheri bbe-miR-219-3p mature miRNA
Sequence 46 - AAGAACUGCGCUGGACAUCAGC - 67
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500