miRBase entry: bbe-mir-29b

Stem-loop bbe-mir-29b


Accession
MI0026232
Description
Branchiostoma belcheri bbe-mir-29b precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

cacugcagguuuucuauccuggaagACUGGUUCCAAGUGGUGGGUAGAuggcacugagaucUAGCACCAUUUGAAAUCAGUGCUuucaggacuag
.............(((((((((((((((((((.(((((((((..(((((.........))))).))))))))).))))))).))))))))).)))

Structure
cacugcagguuuu   -         -       C         GG     ggc 
             cua uccuggaag ACUGGUU CAAGUGGUG  UAGAu   a
             ||| ||||||||| ||||||| |||||||||  |||||   c
             gau aggacuuUC UGACUAA GUUUACCAC  AUcua   u
-------------   c         G       A         -G     gag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-29b-5p

Accession MIMAT0031664
Description Branchiostoma belcheri bbe-miR-29b-5p mature miRNA
Sequence 26 - ACUGGUUCCAAGUGGUGGGUAGA - 48
Evidence not_experimental

Mature bbe-miR-29b-3p

Accession MIMAT0031665
Description Branchiostoma belcheri bbe-miR-29b-3p mature miRNA
Sequence 62 - UAGCACCAUUUGAAAUCAGUGCU - 84
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500