miRBase entry: bbe-mir-34a

Stem-loop bbe-mir-34a


Accession
MI0026236
Description
Branchiostoma belcheri bbe-mir-34a precursor miRNA
Gene family
MIPF0000039; mir-34

Literature search
1 open access papers mention bbe-mir-34a
(1 sentences)

Sequence

ccguucccugugugcugcucUGGCAGUGUGGAUAGCUGGCCGUucugauuauaacagccacugucagcacuaccguaacaacgcacggacugucgacacua
.......(((((((.((...(((.(((((.(((((.((((.(((........))).))))))))).))))).)))...)).))))))).............

Structure
------ccguucc       c  cuc   C     G     C    C   cug 
             cugugug ug   UGG AGUGU GAUAG UGGC GUu   a
             ||||||| ||   ||| ||||| ||||| |||| |||    
             ggcacgc ac   gcc ucacg cuguc accg caa   u
aucacagcuguca       a  aau   a     a     -    a   uau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-34a-5p

Accession MIMAT0031670
Description Branchiostoma belcheri bbe-miR-34a-5p mature miRNA
Sequence 21 - UGGCAGUGUGGAUAGCUGGCCGU - 43
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500