miRBase entry: bbe-mir-34c

Stem-loop bbe-mir-34c


Accession
MI0026238
Description
Branchiostoma belcheri bbe-mir-34c precursor miRNA
Gene family
MIPF0000039; mir-34

Literature search
1 open access papers mention bbe-mir-34c
(1 sentences)

Sequence

auaucgugcagccaucUGGCAGUGUUAUUAGCUGGCcgcuaggagucgcucuuguggccaucuauuaacgcugcccuacggaagcgcgacac
...((((((..((....((((((((((.(((.(((((((.(((((...)))))))))))).))).))))))))))....))..))))))...

Structure
aua      ag  aucU          U   C       u     u 
   ucgugc  cc    GGCAGUGUUA UAG UGGCcgc aggag  
   ||||||  ||    |||||||||| ||| ||||||| ||||| c
   agcgcg  gg    ccgucgcaau auc accggug uucuc  
cac      aa  cauc          u   u       -     g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-34c-5p

Accession MIMAT0031673
Description Branchiostoma belcheri bbe-miR-34c-5p mature miRNA
Sequence 17 - UGGCAGUGUUAUUAGCUGGC - 36
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500