miRBase entry: bbe-mir-92a-1

Stem-loop bbe-mir-92a-1


Accession
MI0026272
Description
Branchiostoma belcheri bbe-mir-92a-1 precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

agaaguuagucaugacaagaAGGUCGUGAUAGGUGGCAAUGUUguacccaccucaaUAUUGCACUUGUCCCGGCCUUUuugc
...............(((((((((((.((((((((.((((((((.........)))))))))))))))).))))))))))).

Structure
agaaguuagucauga           U        G        uac 
               caagaAGGUCG GAUAGGUG CAAUGUUg   c
               ||||||||||| |||||||| ||||||||   c
               guuUUUCCGGC CUGUUCAC GUUAUaac   a
--------------c           C        -        ucc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-92a-5p

Accession MIMAT0031719
Description Branchiostoma belcheri bbe-miR-92a-5p mature miRNA
Sequence 21 - AGGUCGUGAUAGGUGGCAAUGUU - 43
Evidence not_experimental

Mature bbe-miR-92a-3p

Accession MIMAT0031720
Description Branchiostoma belcheri bbe-miR-92a-3p mature miRNA
Sequence 57 - UAUUGCACUUGUCCCGGCCUUU - 78
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500