Stem-loop bbe-mir-9

Accession

MI0026277

Description

Branchiostoma belcheri bbe-mir-9 precursor miRNA

Gene family

MIPF0000014; mir-9

Literature search

1 open access papers mention bbe-mir-9
(2 sentences)

Sequence

gugcugUCUUUGGUUAUCUAGCUGUAUGAgagucuucugucaccaUAAAGCUAGGUAACCAAAACAacaaccacuccccuag
(((.(((.(((((((((((((((...(((.((....)).)))......)))))))))))))))...)))..)))........

Structure

--------   -c   --C               ---GUA   g  u 
        gug  ugU   UUUGGUUAUCUAGCU      UGA ag c
        |||  |||   |||||||||||||||      ||| ||  
        cac  aca   AAACCAAUGGAUCGA      acu uc u
gauccccu   ca   ACA               AAUacc   g  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-9-5p

• Accession: MIMAT0031726
• Description: Branchiostoma belcheri bbe-miR-9-5p mature miRNA
• Sequence: 7 - UCUUUGGUUAUCUAGCUGUAUGA - 29
• Evidence: not_experimental

Mature bbe-miR-9-3p

• Accession: MIMAT0031727
• Description: Branchiostoma belcheri bbe-miR-9-3p mature miRNA
• Sequence: 46 - UAAAGCUAGGUAACCAAAACA - 66
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500