miRBase entry: bbe-mir-4857

Stem-loop bbe-mir-4857


Accession
MI0026286
Description
Branchiostoma belcheri bbe-mir-4857 precursor miRNA
Gene family
MIPF0001842; mir-4857


Sequence

cugugaucACGAUGUUUUUGUCUGCUCCAGAggugaguucgcacgacucUGGGUCAGACGAAACAUCUCAGaucaacg
...(((((..((((((((.(((((.((((((((((......)))..))))))).)))))))))))))...)))))...

Structure
cug     -AC        U     C       --   ag 
   ugauc   GAUGUUUU GUCUG UCCAGAg  gug  u
   |||||   |||||||| ||||| |||||||  |||   
   acuaG   CUACAAAG CAGAC GGGUcuc  cac  u
gca     ACU        -     U       ag   gc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-4857-5p

Accession MIMAT0031735
Description Branchiostoma belcheri bbe-miR-4857-5p mature miRNA
Sequence 9 - ACGAUGUUUUUGUCUGCUCCAGA - 31
Evidence not_experimental

Mature bbe-miR-4857-3p

Accession MIMAT0031736
Description Branchiostoma belcheri bbe-miR-4857-3p mature miRNA
Sequence 50 - UGGGUCAGACGAAACAUCUCAG - 71
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500