miRBase entry: ssa-mir-128-4

Stem-loop ssa-mir-128-4


Accession
MI0026464
Description
Salmo salar ssa-mir-128-4 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

GGGGGCCGUUACACUGUAAGAgauguagucugaggucUCACAGUGAACCGGUCUCUUU
((((((((...((((((..(((((.(......).)))))))))))...))))))))..

Structure
--        UUA      AA     g ag 
  GGGGGCCG   CACUGU  GAgau u  u
  ||||||||   ||||||  ||||| |   
  UCUCUGGC   GUGACA  CUcug a  c
UU        CAA      --     g gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-128-3p

Accession MIMAT0032314
Description Salmo salar ssa-miR-128-3p mature miRNA
Sequence 38 - UCACAGUGAACCGGUCUCUUU - 58
Evidence experimental
Illumina [1]

Mature ssa-miR-128-4-5p

Accession MIMAT0032317
Description Salmo salar ssa-miR-128-4-5p mature miRNA
Sequence 1 - GGGGGCCGUUACACUGUAAGA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482