Stem-loop ssa-mir-130d-2

Accession

MI0026473

Description

Salmo salar ssa-mir-130d-2 precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

GCCCUUUUACUGCUGUACUACUgugaaaucagaugagCAGUGCAAUAUUAAAAGGGCA
(((((((((.((.((((((.((.............)).)))))).)).))))))))).

Structure

-         C  C      A  gugaa 
 GCCCUUUUA UG UGUACU CU     a
 ||||||||| || |||||| ||     u
 CGGGAAAAU AU ACGUGA ga     c
A         U  A      C  guaga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-130d-3p

• Accession: MIMAT0032328
• Description: Salmo salar ssa-miR-130d-3p mature miRNA
• Sequence: 38 - CAGUGCAAUAUUAAAAGGGCA - 58
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-130d-2-5p

• Accession: MIMAT0032329
• Description: Salmo salar ssa-miR-130d-2-5p mature miRNA
• Sequence: 1 - GCCCUUUUACUGCUGUACUACU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482