miRBase entry: ssa-mir-132-4

Stem-loop ssa-mir-132-4


Accession
MI0026478
Description
Salmo salar ssa-mir-132-4 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

ACCGUGGCAUUAGAUUGUUACUguagcaacagcaccacuggUAACAGUCUACAGCCAUGGUCG
((((((((..((((((((((((((.((....))...)).))))))))))))..))))))))..

Structure
--        AU            -  --a  a 
  ACCGUGGC  UAGAUUGUUACU gu   gc a
  ||||||||  |||||||||||| ||   ||  
  UGGUACCG  AUCUGACAAUgg ca   cg c
GC        AC            u  cca  a 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-132-3p

Accession MIMAT0032332
Description Salmo salar ssa-miR-132-3p mature miRNA
Sequence 42 - UAACAGUCUACAGCCAUGGUCG - 63
Evidence experimental
Illumina [1]

Mature ssa-miR-132-4-5p

Accession MIMAT0032334
Description Salmo salar ssa-miR-132-4-5p mature miRNA
Sequence 1 - ACCGUGGCAUUAGAUUGUUACU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482