Stem-loop ssa-mir-153a-2

Accession

MI0026518

Description

Salmo salar ssa-mir-153a-2 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

UCAUCUUUGUGAUUUGCAGCUaguagucuggguccagUUGCAUAGUCACAAAAAUGAUC
((((.((((((((((((((((.(..........).))))))).))))))))).))))..

Structure

--    C         -       a uagu 
  UCAU UUUGUGAUU UGCAGCU g    c
  |||| ||||||||| ||||||| |     
  AGUA AAACACUGA ACGUUga c    u
CU    A         U       c uggg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-153a-3p

• Accession: MIMAT0032388
• Description: Salmo salar ssa-miR-153a-3p mature miRNA
• Sequence: 38 - UUGCAUAGUCACAAAAAUGAUC - 59
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-153a-2-5p

• Accession: MIMAT0032389
• Description: Salmo salar ssa-miR-153a-2-5p mature miRNA
• Sequence: 1 - UCAUCUUUGUGAUUUGCAGCU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482