Stem-loop ssa-mir-19c-3

Accession

MI0026574

Description

Salmo salar ssa-mir-19c-3 precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

CGUUUUGCUGGUUUGCUUUCAGCuuuucaauguaccgcUGUGCAAAUCCAUGCAAAACUG
.(((((((((((((((...((((.............)))).))))).))).)))))))..

Structure

-C       -   -     UUU    uuuuc 
  GUUUUGC UGG UUUGC   CAGC     a
  ||||||| ||| |||||   ||||     a
  CAAAACG ACC AAACG   GUcg     u
GU       U   U     --U    ccaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-19c-3p

• Accession: MIMAT0032466
• Description: Salmo salar ssa-miR-19c-3p mature miRNA
• Sequence: 39 - UGUGCAAAUCCAUGCAAAACUG - 60
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-19c-3-5p

• Accession: MIMAT0032467
• Description: Salmo salar ssa-miR-19c-3-5p mature miRNA
• Sequence: 1 - CGUUUUGCUGGUUUGCUUUCAGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482