Stem-loop ssa-mir-19c-4

Accession

MI0026575

Description

Salmo salar ssa-mir-19c-4 precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

AGUUUUGCUGGUUUGCUUUCAGcuuuucaauguacugcUGUGCAAAUCCAUGCAAAACUG
((((((((((((((((...((((.............)))).))))).))).)))))))).

Structure

-        -   -     UUU    uuuuc 
 AGUUUUGC UGG UUUGC   CAGc     a
 |||||||| ||| |||||   ||||     a
 UCAAAACG ACC AAACG   GUcg     u
G        U   U     --U    ucaug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-19c-3p

• Accession: MIMAT0032466
• Description: Salmo salar ssa-miR-19c-3p mature miRNA
• Sequence: 39 - UGUGCAAAUCCAUGCAAAACUG - 60
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-19c-4-5p

• Accession: MIMAT0032468
• Description: Salmo salar ssa-miR-19c-4-5p mature miRNA
• Sequence: 1 - AGUUUUGCUGGUUUGCUUUCAG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482