miRBase entry: ssa-mir-203a-2

Stem-loop ssa-mir-203a-2


Accession
MI0026588
Description
Salmo salar ssa-mir-203a-2 precursor miRNA
Gene family
MIPF0000108; mir-203


Sequence

AGUGGUUCUUAACAGUUCAACAguucuuugccaaaauuGUGAAAUGUUUAGGACCACUUG
(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..

Structure
--         U    G    A     cuu 
  AGUGGUUCU AACA UUCA CAguu   u
  ||||||||| |||| |||| |||||   g
  UCACCAGGA UUGU AAGU Guuaa   c
GU         U    A    -     aac 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-203a-3p

Accession MIMAT0032484
Description Salmo salar ssa-miR-203a-3p mature miRNA
Sequence 39 - GUGAAAUGUUUAGGACCACUUG - 60
Evidence experimental
Illumina [1]

Mature ssa-miR-203a-2-5p

Accession MIMAT0032485
Description Salmo salar ssa-miR-203a-2-5p mature miRNA
Sequence 1 - AGUGGUUCUUAACAGUUCAACA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482