miRBase entry: ssa-mir-206

Stem-loop ssa-mir-206


Accession
MI0026600
Description
Salmo salar ssa-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

ACAUGCUUCCUUAUAUCCCCAuaugaauacugcuguuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure
--                CC     ugaau 
  ACAUGCUUCCUUAUAU  CCAua     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     u
GG                -A     ugucg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-206-5p

Accession MIMAT0032500
Description Salmo salar ssa-miR-206-5p mature miRNA
Sequence 1 - ACAUGCUUCCUUAUAUCCCCA - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-206-3p

Accession MIMAT0032501
Description Salmo salar ssa-miR-206-3p mature miRNA
Sequence 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482